Synlett 2025; 36(08): 1074-1078
DOI: 10.1055/a-2499-3635
letter

Concise Total Synthesis of Crambescin B Methyl Ester

Atsuo Nakazaki
a   Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8601, Japan
b   Faculty of Science and Engineering, Iwate University, Ueda 4-3-5, Morioka 020-8551, Japan
,
Kotaro Tandai
a   Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8601, Japan
,
Toshio Nishikawa
a   Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8601, Japan
› Author Affiliations
This work was partially supported by a Grants-in-Aid for Scientific Research (B) (No. 19H02896 and 24K01636) and (C) (No. 20K05863 and 24K08722), as well as a Grant-in-Aid on Innovative Areas ‘Frontier Research on Chemical Communication’ (No. 20H04771) from MEXT. Additional support was provided by the Naito Science and Engineering Foundation, the Nagase Science and Technology Foundation, and the Iketani Science and Technology Foundation.


Abstract

In this study, a concise total synthesis of crambescin B methyl ester, a cyclic guanidine alkaloid, has been achieved. The key aspects of this new approach include (1) A Mannich reaction between an α-amidosulfone and a β-keto ester to construct the main scaffold, and (2) acid-catalyzed dehydrative cyclization, leading to an enol ether in a highly stereoselective manner. This synthetic approach is nine steps shorter than our previously published method.

Supporting Information



Publication History

Received: 07 November 2024

Accepted after revision: 09 December 2024

Accepted Manuscript online:
09 December 2024

Article published online:
08 January 2025

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  • References and Notes

  • 7 Moody CJ, Shah P. J. Chem. Soc., Perkin Trans. 1 1988; 1407
  • 8 Fesenko AA, Shutalev AD. Tetrahedron 2015; 71: 9528
  • 9 Mannich Adduct 10 This compound was synthesized according to the reported procedure.8 A solution of β-keto ester 9 (490 mg, 1.79 mmol) in anhyd THF (3.0 mL) was added to a suspension of a 60% dispersion of NaH in mineral oil (42 mg, 1.8 mmol) in anhyd THF (1.5 mL) at 0 °C, and the resulting mixture was stirred at 0 °C for 25 min. A solution of the α-amidosulfone 5 (740 mg, 1.61 mmol) in anhyd THF (3.0 mL) was then added, and the mixture was stirred at r.t. for 20 h. The reaction was then quenched with sat. aq NH4Cl. EtOAc (30 mL) was added, and the resulting mixture was partitioned. The organic layer was washed with H2O (3 × 15 mL) then dried (Na2SO4) and concentrated under reduced pressure. The residue was purified by flash column chromatography [neutral silica gel, hexane–EtOAc (9:1 to 3:1)] to give a pale-yellow oil; yield: 840 mg (88%; dr = 54:46 as determined by 1H NMR analysis). IR (film): 1717, 1507, 1254, 1097 cm–1. 1H NMR (400 MHz, CDCl3): δ = 0.03 (s, 6 H, CH3 of TBS), 0.85–0.91 (m, 12 H, t-Bu of TBS, CH3 ), 1.15–1.40 [m, 18 H, –CH2(CH2 )9CH3], 1.41–1.65 [m, 2 H, –CH2 (CH2)9CH3], 1.67–1.85 (m, 2 H, –CH2CH2 CH2–), 2.63 [t, J = 7 Hz, 2 H, –CH2C(=O)CH2 –], 3.34–3.62 (m, 2 H, –CH2 OTBS), 3.72 (s, 3 H, –OCH3 ), 3.77 [d, J = 5.5 Hz, 1 H, –C(=O)CHC(=O)–], 4.22 (m, 1 H, –HNCHCH–), 5.07 [s, 2 H, –C(=O)OCH2 Ph], 5.49 [br d, J = 10 Hz, 0.46 H, –C(=O)NH–], 5.68 [br d, J = 10 Hz, 0.54 H, –C(=O)NH–], 7.27–7.38 (m, 5 H, Ph). 13C NMR (100 MHz, CDCl3): δ = –5.2, 14.3, 18.4, 22.8, 26.1, 26.6, 29.3, 29.5, 29.6, 29.7, 29.8, 32.1, 33.4, 40.0, 51.4, 52.7, 60.8, 61.9, 66.7, 128.1, 128.2, 128.6, 136.8, 156.0, 168.9, 205.6. HRMS (ESI, positive): m/z [M + Na]+ calcd for C33H57NNaO6Si: 614.3847; found: 614.3833.
  • 10 Snider reported that the related cyclization of an N-guanylated system provided a 1:1 mixture of E- and Z-isomers: see ref. 2b.
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  • 13 For a related method for preventing the formation of HCHO using EtOH instead of MeOH, see: Benoiton NL. Int. J. Pept. Protein Res. 1993; 41: 611