Methods Inf Med 2013; 52(04): 297-307
DOI: 10.1055/s-0038-1627059
Original Articles
Schattauer GmbH

Discussion of “Time-frequency Techniques in Biomedical Signal Analysis: A Tutorial Review of Similarities and Differences”

C. Baumgartner
1   Institute of Electrical and Biomedical Engineering, Department for Biomedical Informatics and Mechatronics, UMIT – The Health and Life Sciences University, Hall in Tirol, Austria
,
K. J. Blinowska
2   Faculty of Physics, University of Warsaw, Warsaw, Poland
,
A. Cichocki
3   Laboratory for Advanced Brain Signal Processing, Brain Science Institute RIKEN, Saitama, Japan, and Systems Research Institute, Polish Academy of Science, Warsaw, Poland
,
H. Dickhaus
4   Institute of Medical Biometry and Informatics, Heidelberg University Hospital, Heidelberg, Germany
,
P. J. Durka
2   Faculty of Physics, University of Warsaw, Warsaw, Poland
,
P. V. E. McClintock
5   Department of Physics, Lancaster University, Lancaster, United Kingdom
,
G. Pfurtscheller
6   Institute for Knowledge Discovery, Laboratory of Brain-Computer Interfaces, Graz University of Technology, Graz, Austria
,
A. Stefanovska
5   Department of Physics, Lancaster University, Lancaster, United Kingdom
,
S. Tong
7   Neural Engineering Lab, Med-X Research Institute, Shanghai Jiao Tong University, Shanghai, China
› Author Affiliations
Further Information

Publication History

Publication Date:
20 January 2018 (online)

 
  • References

  • 1 Wacker M, Witte H. Time-frequency techniques in biomedical signal analysis: A tutorial review of similarities and differences. Methods Inf Med 2013; 52 (04) 279-296.
  • 2 Blinowska KJ, Durka P J. Unbiased high resolution method of EEG analysis in time-frequency space. Acta Neurobiol Exp 2001; 61: 157-174.
  • 3 Blinowska KJ, Zygierewicz J. Practical Biomedical Signal Analysis Using Matlab. Boca Raton, London, New York: CRC Press; 2011.
  • 4 Zygierewicz J, Blinowska KJ, Durka PJ, Szelenberger W, Niemcewicz S, Androsiuk W. High resolution study of sleep spindles. Clin Neurophys 1999; 110: 2136-2147.
  • 5 Durka PJ, Malinowska U, Szelenberger W, Wakarow A, Blinowska KJ. High resolution parametric description of slow wave sleep. J Neurosc Meth 2005; 147: 15-21.
  • 6 Malinowska U, Klekowicz H, Wakarow A, Niemcewicz S, Durka PJ. Fully parametric sleep staging compatible with the classic criteria. Neuroinf 2009; 7: 245-253.
  • 7 Durka PJ, Matysiak A, Martinez-Montes E, Valdes Sosa P, Blinowska KJ. Multichannel matching pursuit and EEG inverse solutions. Journal of Neuroscience Methods 2005; 148: 49-59.
  • 8 Matysiak A, Durka PJ, Martinez Montes E, Barwinski M, Zwolinski P, Roszkowski M K, Blinowska KJ. Time-frequency-space localization of epileptic EEG oscillations. Acta Neurobiol Exp 2005; 65: 435-442.
  • 9 Jedrzejczak WW, Kwaskiewicz K, Blinowska KJ, Kochanek K, Skarzynski H. Use of Matching Pursuit algorithm with a dictionary of asymmetric waveforms in the analysis of otoacoustic emissions. J Acoust Soc Am 2009; 126: 3137-3146.
  • 10 Cichocki A, Zdunek R, Phan AH, Amari S. Nonnegative Matrix and Tensor Factorizations: Applications to Exploratory Multi-way Data Analysis. John Wiley; 2009. ISBN: 978-0-470-74666-0 2009.
  • 11 Phan AH, Cichocki A. Tensor decompositions for feature extraction and classification of high dimensional datasets. Nonlinear Theory and Its Applications. IEICE 2010; 1 (01) 37-68.
  • 12 Vialatte FB, Sole-Casals J, Dauwels J, Maurice M, Cichocki A. Bump time-frequency toolbox: A toolbox for time-frequency oscillatory bursts extraction in electrophysiological signals. BMC Neurosci 2009; 10 (01) 46
  • 13 Dauwels J, Weber T, Vialatte F, Musha T, Cichocki A. Quantifying statistical interdependence, Part I-III. Neural Comput 2012; 24 (02) 408-454.
  • 14 Sun J, Tsourakakis CE, Hoke E, Faloutsos C, Eliassi-Rad T. Two heads better than one: pattern discovery in time-evolving multi-aspect data. Data Mining Knowledge Discovery 2008; 17: 111-128. DOI 10.1007/s10618-008-0112-3
  • 15 Boudreaux-Bartels GF. Time-frequency signal processing algorithms: Analysis and synthesis using Wigner distribution (PhD thesis). Rice University. 1983.
  • 16 Hlawatsch F, Boudreaux-Bartels GF. Linear and quadratic time-frequency signal representations. Signal Processing Magazine. IEEE 1992; 9 (02) 21-67.
  • 17 Cohen L. Time-frequency distributions-a review. Proceedings of the IEEE 1989; 77 (07) 941-981.
  • 18 Flandrin P. Time-frequency and time-scale (signal processing). In: Proc. Fourth Annual ASSP Workshop Spectrum Estimation and Modeling. 1988: 77-80.
  • 19 Martin W, Flandrin P. Wigner-Ville spectral analysis of nonstationary processes. Acoustics, Speech and Signal Processing. IEEE Transactions on 1985; 33 (06) 1461-1170.
  • 20 Huang NE, Shen Z, Long SR, Wu MC, Shih HH, Zheng Q. et al The empirical mode decomposition and the Hilbert spectrum for nonlinear and nonstationary time-series analysis. Proceedings of the Royal Society of London 1998; 454: 903-995.
  • 21 Huang NE, Attoh-Okine NO. The Hilbert-Huang Transform in Engineering. Taylor & Francis/CRC. 2005.
  • 22 Mallat SG. A theory for multiresolution signal decomposition: the wavelet representation. Pattern Analysis and Machine Intelligence, IEEE Transactions on 1989; 11 (07) 674-93.
  • 23 Mallat SG, Zhang Z. Matching pursuits with time-frequency dictionaries. Signal Processing, IEEE Transactions on 1993; 41 (12) 3397-3415.
  • 24 Rioul O, Vetterli M. Wavelets and signal processing. Signal Processing Magazine, IEEE 1991; 8 (04) 14-38.
  • 25 Choi H, Williams WJ. Improved time-frequency representation of multicomponent signals using exponential kernels. Acoustics, Speech and Signal Processing, IEEE Transactions on 1989; 37 (06) 862-871.
  • 26 Akay M. editor Time Frequency and Wavelets in Biomedical Signal Processing. Wiley-IEEE Press; 1997.
  • 27 Unser M, Aldroubi A. A review of wavelets in biomedical applications. Proceedings of the IEEE 1996; 84 (04) 626-638.
  • 28 Wacker M, Putsche P, Witte H. Time-variant analysis of linear and non-linear phase couplings of and between frequency components of EEG burst patterns in full-term newborns. In: Proc. Annual Int Engineering in Medicine and Biology Society (EMBC) Conf of the IEEE. 2010: 1706-1709.
  • 29 Aldroubi A, Unser M. Wavelets in Medicine and Biology. Boca Raton, FL, USA: CRC Press; 1996.
  • 30 Chen T, Wang X, Chung S, Metaxas D, Axel L. Automated 3D Motion Tracking Using Gabor Filter Bank, Robust Point Matching, and Deformable Models. Medical Imaging, IEEE Transactions on 2010; 29 (01) 1-11.
  • 31 Buckheit J, Donoho DL. Wavelets and Statistics, chapter Wavelab and reproducible research. Berlin, New York: Springer-Verlag; 1995.
  • 32 Durka PJ. On the methodological unification in electroencephalography. Biomed Eng Online 2005; 4: 15
  • 33 Durka PJ. Matching Pursuit and Unification in EEG analysis. Engineering in Medicine and Biology. Artech House. 2007. ISBN 978-1-58053-304-1
  • 34 Rechtschaffen A, Kales A. editors A manual of standardized terminology, techniques and scoring system for sleep stages in human subjects. Number 204 in National Institutes of Health Publications. US Government Printing Office; Washington DC: 1968.
  • 35 Schwab M, Karrenbach N, Claerbout J. Making scientific computations reproducible. Computing in Science and Engineering 2000; 2 (06) 61-67.
  • 36 Sieluzycki C, König R, Matysiak A, Kus R, Ircha D, Durka PJ. Single-trial evoked brain responses modeled by multivariate matching pursuit. IEEE TransBiomed Eng 2009; 56 (01) 74-82.
  • 37 Studer D, Hoffmann U, Koenig T. From EEG dependency multichannelmatching pursuit to sparse topographic decomposition. J Neurosci Methods 2006; 153 (02) 261-275.
  • 38 Yang F, Liao W. Modeling and decomposition of HRV signals with wavelet transforms. IEEE Engin Med Biol Mag 1997; 16 (04) 17-32.
  • 39 Bračič Lotrič M, Stefanovska A, Štajer D, Urbančič-Rovan V. Spectral components of heart rate variability determined by wavelet analysis. Physiol Meas 2000; 21: 441-457.
  • 40 Bračič M. Stefanovska A. Wavelet based analysis of human blood flow dynamics. Bull Math Biol 1998; 60: 919-935.
  • 41 Thurner S, Feurstein MC, Teich MC. Multiresolution wavelet analysis of heartbeat intervals discriminates healthy patients from those with cardiac pathology. Phys Rev Lett 1998; 80: 1544-1547.
  • 42 Stefanovska A, Bračič M. Physics of the human cardiovascular system. Contemp Phys. 1999; 40: 31-55.
  • 43 Stefanovska A. Coupled oscillators: Complex but not complicated cardiovascular and brain interactions. IEEE Eng Med Biol Mag 2007; 26: 25-29.
  • 44 Effern A, Lehnertz K, Grunwald T, Fernandez G, David P, Elger CE. Time adaptive denoising of single trial event-related potentials in the wavelet domain. Psychophysiol 2000; 27: 959-865.
  • 45 Urbančič-Rovan V, Bernjak A, Stefanovska A, Ažman-Juvan K, Kocijančič A. Macro- and microcirculation in the lower extremities - Possible relationship. Diabetes Res Clin Pract 2006; 73: 166-173.
  • 46 Ažman-Juvan K, Bernjak A, Urbančič-Rovan V, Stefanovska A, Štajer D. Skin blood flow and its oscillatory components in patients with acute myocardial infarction. J Vasc Res 2008; 45: 164-172.
  • 47 Bernjak A, Clarkson PBM, McClintock PVE, Stefanovska A. Low-frequency blood flow oscillations in congestive heart failure and after beta 1-blockade treatment. Microvasc Res 2008; 76: 224-232.
  • 48 Rossi M, Bradbury A, Magagna A, Pesce M, Taddei S, Stefanovska A. Investigation of skin vasoreactivity and blood flow oscillations in hypertensive patients: Effect of short-term antihypertensive treatment. J Hypertens 2011; 29: 1569-1576.
  • 49 Humeau A, Chapeau-Blondeau F, Rousseau D, Rousseau P, Trzepizur W, Abraham P. Multifractality, sample entropy, and wavelet analyses for age-related changes in the peripheral cardiovascular system: Preliminary results. Med Phys 2008; 35 (02) 717-723.
  • 50 Shiogai Y, Stefanovska A, McClintock PVE. Nonlinear dynamics of cardiovascular ageing. Phys Rep 2010; 488: 51-110.
  • 51 Daubechies I, Lu J, Wu H. Synchrosqueezed wavelet transforms: An empirical mode decomposition-like tool. Appl and Comput Harmon Anal 2011; 30: 243-261.
  • 52 Iatsenko D, Bernjak A, Stankovski T, Shiogai Y, Owen-Lynch PJ, Clarkson PBM, McClintock PVE, Stefanovska A. Evolution of cardio-respiratory interactions with age. Philos Trans R Soc London, A 2013; 371 1997 20110622
  • 53 Sheppard LW, Stefanovska A, McClintock PVE. Detecting the harmonics of oscillations with time-variable frequencies. Phys Rev E 2011; 83: 016206
  • 54 Paluš M. Vejmelka M. Directionality of coupling from bivariate time series: how to avoid false causalities and missed connections. Phys Rev E 2007; 75: 056211
  • 55 Le Van Quyen M, Foucher J, Lachaux JP, Rodriguez E, Lutz A, Martinerie J, Varela FJ. Comparison of Hilbert transform and wavelet methods for the analysis of neuronal synchrony. J Neurosci Methods 2001; 111 (02) 83-98.
  • 56 Bandrivskyy A, Bernjak A, McClintock PVE, Stefanovska A. Wavelet phase coherence analysis: application to skin temperature and blood flow. Cardiovasc Engin 2004; 4 (01) 89-93.
  • 57 Sheppard LW, Stefanovska A, McClintock PVE. Testing for time-localized coherence in bivariate data. Phys Rev E 2012; 85: 046205
  • 58 Schäfer C, Rosenblum MG, Kurths J. Heartbeat synchronised with respiration. Nature 1998; 392: 239-240.
  • 59 Stefanovska A, Haken H, McClintock PVE, Hožič M, Bajroviæ F, Ribarič S. Reversible transitions between synchronization states of the cardiorespiratory system. Phys Rev Lett 2000; 85: 4831-4834.
  • 60 Kenwright DA, Bahraminasab A, Stefanovska A, McClintock PVE. The effect of low-frequency oscillations on cardio-respiratory synchronization. Eur Phys J B 2008; 65: 425-433.
  • 61 Tass P, Rosenblum MG, Weule J, Kurths J, Pikovsky AS, Volkmann J, Schnitzler A, Freund H-J. Detection of n:m phase locking from noisy data: Application to magnetoencephalography. Phys Rev Lett 1998; 81: 3291-3294.
  • 62 Rosenblum MG, Pikovsky AS. Detecting direction of coupling in interacting oscillators. Phys Rev E 2001; 64 (04) 045202
  • 63 Paluš M. Stefanovska A. Direction of coupling from phases of interacting oscillators: An information-theoretic approach. Phys Rev E 2003; 67: 055201(R)
  • 64 Jamšek J, Paluš M. Stefanovska A. Detecting couplings between interacting oscillators with time-varying basic frequencies: instantaneous wavelet bispectrum and information theoretic approach. Phys Rev E 2010; 81 (03) 036207
  • 65 Musizza B, Stefanovska A, McClintock PVE, Paluš M, Petrovčič J, Ribarič S, Bajrovič F. Interactions between cardiac, respiratory and EEG-delta oscillations in rats during anæsthesia. J Physiol 2007; 580 (01) 315-326.
  • 66 Kralemann B, Cimponeriu L, Rosenblum M, Pikovsky A, Mrowka R. Phase Dynamics of coupled oscillators reconstructed from data. Phys Rev E 2008; 77: 066205
  • 67 Stankovski T, Duggento A, McClintock PVE, Stefanovska A. Inference of time-evolving coupled dynamical systems in the presence of noise. Phys Rev Lett 2012; 109: 024101
  • 68 Duggento A, Stankovski T, McClintock PVE, Stefanovska A. Dynamical Bayesian inference of time-evolving interactions: From a pair of coupled oscillators to networks of oscillators. Phys Rev E 2012; 86: 061126
  • 69 Durka PJ, Blinowska KJ. Analysis of EEG transients by means of matching pursuit. Ann Biomed Eng 1995; 23 (05) 608-611.
  • 70 Franaszczuk PJ, Bergey GK, Durka PJ, Eisenberg HM. Time-frequency analysis using the matching pursuit algorithm applied to seizures originating from the mesial temporal lobe. Electroencephalogr Clin Neurophysiol 1998; 106 (06) 513-521.
  • 71 Tong S, Li Z, Zhu Y, Thakor NV. Describing the nonstationarity level of neurological signals based on quantifications of time-frequency representation. IEEE Trans Biomed Eng 2007; 54 (10) 1780-1785.