Semin Reprod Med 2012; 30(04): 302-308
DOI: 10.1055/s-0032-1313909
Thieme Medical Publishers 333 Seventh Avenue, New York, NY 10001, USA.

Aneuploidy and Copy Number Variation in Early Human Development

Evelyne Vanneste
1   Laboratory for Cytogenetics and Genome Research
3   Center for Human Genetics, K.U. Leuven, UZ Gasthuisberg, Leuven, Belgium
,
Niels Van der Aa
2   Laboratory for Reproductive Genomics
3   Center for Human Genetics, K.U. Leuven, UZ Gasthuisberg, Leuven, Belgium
,
Thierry Voet
2   Laboratory for Reproductive Genomics
3   Center for Human Genetics, K.U. Leuven, UZ Gasthuisberg, Leuven, Belgium
,
Joris Robert Vermeesch Prof.
1   Laboratory for Cytogenetics and Genome Research
3   Center for Human Genetics, K.U. Leuven, UZ Gasthuisberg, Leuven, Belgium
› Author Affiliations
Further Information

Publication History

Publication Date:
21 June 2012 (online)

Abstract

Early human in vitro fertilized embryos frequently accumulate whole chromosome aneuploidies and segmental imbalances. This embryonic chromosomal instability does not necessarily undermine normal human development, but it may lead to loss of conception, genetic disease, and genetic variation development. In this review we provide an overview of how this instability of chromosomes arises and evolves during early human embryogenesis.

 
  • References

  • 1 Hastings PJ, Lupski JR, Rosenberg SM, Ira G. Mechanisms of change in gene copy number. Nat Rev Genet 2009; 10 (8) 551-564
  • 2 Stratton MR, Campbell PJ, Futreal PA. The cancer genome. Nature 2009; 458 (7239) 719-724
  • 3 Gianaroli L, Magli MC, Ferraretti AP. The in vivo and in vitro efficiency and efficacy of PGD for aneuploidy. Mol Cell Endocrinol 2001; 183 (Suppl. 01) S13-S18
  • 4 Delhanty JD. Mechanisms of aneuploidy induction in human oogenesis and early embryogenesis. Cytogenet Genome Res 2005; 111 (3–4) 237-244
  • 5 Rubio C, Simón C, Vidal F , et al. Chromosomal abnormalities and embryo development in recurrent miscarriage couples. Hum Reprod 2003; 18 (1) 182-188
  • 6 Munné S, Sandalinas M, Magli C, Gianaroli L, Cohen J, Warburton D. Increased rate of aneuploid embryos in young women with previous aneuploid conceptions. Prenat Diagn 2004; 24 (8) 638-643
  • 7 Baart EB, Martini E, van den Berg I , et al. Preimplantation genetic screening reveals a high incidence of aneuploidy and mosaicism in embryos from young women undergoing IVF. Hum Reprod 2006; 21 (1) 223-233
  • 8 Voullaire L, Slater H, Williamson R, Wilton L. Chromosome analysis of blastomeres from human embryos by using comparative genomic hybridization. Hum Genet 2000; 106 (2) 210-217
  • 9 Rius M, Daina G, Obradors A , et al. Comprehensive embryo analysis of advanced maternal age-related aneuploidies and mosaicism by short comparative genomic hybridization. Fertil Steril 2011; 95 (1) 413-416
  • 10 Wells D, Delhanty JD. Comprehensive chromosomal analysis of human preimplantation embryos using whole genome amplification and single cell comparative genomic hybridization. Mol Hum Reprod 2000; 6 (11) 1055-1062
  • 11 Voullaire L, Wilton L, McBain J, Callaghan T, Williamson R. Chromosome abnormalities identified by comparative genomic hybridization in embryos from women with repeated implantation failure. Mol Hum Reprod 2002; 8 (11) 1035-1041
  • 12 Wilton L, Voullaire L, Sargeant P, Williamson R, McBain J. Preimplantation aneuploidy screening using comparative genomic hybridization or fluorescence in situ hybridization of embryos from patients with recurrent implantation failure. Fertil Steril 2003; 80 (4) 860-868
  • 13 Daphnis DD, Fragouli E, Economou K , et al. Analysis of the evolution of chromosome abnormalities in human embryos from Day 3 to 5 using CGH and FISH. Mol Hum Reprod 2008; 14 (2) 117-125
  • 14 Voullaire L, Wilton L, Slater H, Williamson R. Detection of aneuploidy in single cells using comparative genomic hybridization. Prenat Diagn 1999; 19 (9) 846-851
  • 15 Vanneste E, Voet T, Le Caignec C , et al. Chromosome instability is common in human cleavage-stage embryos. Nat Med 2009; 15 (5) 577-583
  • 16 Geigl JB, Obenauf AC, Waldispuehl-Geigl J , et al. Identification of small gains and losses in single cells after whole genome amplification on tiling oligo arrays. Nucleic Acids Res 2009; 37 (15) e105
  • 17 Iwamoto K, Bundo M, Ueda J , et al. Detection of chromosomal structural alterations in single cells by SNP arrays: a systematic survey of amplification bias and optimized workflow. PLoS ONE 2007; 2 (12) e1306
  • 18 Fiegler H, Geigl JB, Langer S , et al. High resolution array-CGH analysis of single cells. Nucleic Acids Res 2007; 35 (3) e15
  • 19 Treff NR, Su J, Tao X, Levy B, Scott Jr RT. Accurate single cell 24 chromosome aneuploidy screening using whole genome amplification and single nucleotide polymorphism microarrays. Fertil Steril 2010; 94 (6) 2017-2021
  • 20 Treff NR, Levy B, Su J, Northrop LE, Tao X, Scott Jr RT. SNP microarray-based 24 chromosome aneuploidy screening is significantly more consistent than FISH. Mol Hum Reprod 2010; 16 (8) 583-589
  • 21 Hellani A, Abu-Amero K, Azouri J, El-Akoum S. Successful pregnancies after application of array-comparative genomic hybridization in PGS-aneuploidy screening. Reprod Biomed Online 2008; 17 (6) 841-847
  • 22 Johnson DS, Gemelos G, Baner J , et al. Preclinical validation of a microarray method for full molecular karyotyping of blastomeres in a 24-h protocol. Hum Reprod 2010; 25 (4) 1066-1075
  • 23 Wells D, Alfarawati S, Fragouli E. Use of comprehensive chromosomal screening for embryo assessment: microarrays and CGH. Mol Hum Reprod 2008; 14 (12) 703-710
  • 24 Alfarawati S, Fragouli E, Colls P, Wells D. First births after preimplantation genetic diagnosis of structural chromosome abnormalities using comparative genomic hybridization and microarray analysis. Hum Reprod 2011; 26 (6) 1560-1574
  • 25 Fishel S, Gordon A, Lynch C , et al. Live birth after polar body array comparative genomic hybridization prediction of embryo ploidy—the future of IVF?. Fertil Steril 2010; 93 (3) 1006 , e7–e1006, e10
  • 26 Santos MA, Kuijk EW, Macklon NS. The impact of ovarian stimulation for IVF on the developing embryo. Reproduction 2010; 139 (1) 23-34
  • 27 Rodríguez-Santiago B, Malats N, Rothman N , et al. Mosaic uniparental disomies and aneuploidies as large structural variants of the human genome. Am J Hum Genet 2010; 87 (1) 129-138
  • 28 Conlin LK, Thiel BD, Bonnemann CG , et al. Mechanisms of mosaicism, chimerism and uniparental disomy identified by single nucleotide polymorphism array analysis. Hum Mol Genet 2010; 19 (7) 1263-1275
  • 29 Macklon NS, Geraedts JP, Fauser BC. Conception to ongoing pregnancy: the ‘black box’ of early pregnancy loss. Hum Reprod Update 2002; 8 (4) 333-343
  • 30 Mkrtchyan H, Gross M, Hinreiner S , et al. Early embryonic chromosome instability results in stable mosaic pattern in human tissues. PLoS ONE 2010; 5 (3) e9591
  • 31 Baart EB, Martini E, Eijkemans MJ , et al. Milder ovarian stimulation for in-vitro fertilization reduces aneuploidy in the human preimplantation embryo: a randomized controlled trial. Hum Reprod 2007; 22 (4) 980-988
  • 32 Voet T, Vanneste E, Vermeesch JR. The human cleavage stage embryo is a cradle of chromosomal rearrangements. Cytogenet Genome Res 2011; 133 (2–4) 160-168
  • 33 Hassold T, Hunt P. To err (meiotically) is human: the genesis of human aneuploidy. Nat Rev Genet 2001; 2 (4) 280-291
  • 34 Fragouli E, Alfarawati S, Goodall NN, Sanchez-Garcia JF, Colls P, Wells D. The cytogenetics of polar bodies: insights into female meiosis and the diagnosis of aneuploidy. Mol Hum Reprod 2011; ; April 14 (Epub ahead of print)
  • 35 Hassold T, Hall H, Hunt P. The origin of human aneuploidy: where we have been, where we are going. Hum Mol Genet 2007; (16 Spec No. 2) R203-R208
  • 36 Rubio C, Simón C, Vidal F , et al. Chromosomal abnormalities and embryo development in recurrent miscarriage couples. Hum Reprod 2003; 18 (1) 182-188
  • 37 Munné S, Sandalinas M, Magli C, Gianaroli L, Cohen J, Warburton D. Increased rate of aneuploid embryos in young women with previous aneuploid conceptions. Prenat Diagn 2004; 24 (8) 638-643
  • 38 Voet T, Vanneste E, Van der Aa N , et al. Breakage-fusion-bridge cycles leading to inv dup del occur in human cleavage stage embryos. Hum Mutat 2011; 32 (7) 783-793
  • 39 Wilton L. Preimplantation genetic diagnosis and chromosome analysis of blastomeres using comparative genomic hybridization. Hum Reprod Update 2005; 11 (1) 33-41
  • 40 Gregan J, Polakova S, Zhang L, Tolić-Nørrelykke IM, Cimini D. Merotelic kinetochore attachment: causes and effects. Trends Cell Biol 2011; 21 (6) 374-381
  • 41 Coonen E, Derhaag JG, Dumoulin JC , et al. Anaphase lagging mainly explains chromosomal mosaicism in human preimplantation embryos. Hum Reprod 2004; 19 (2) 316-324
  • 42 Michel LS, Liberal V, Chatterjee A , et al. MAD2 haplo-insufficiency causes premature anaphase and chromosome instability in mammalian cells. Nature 2001; 409 (6818) 355-359
  • 43 Delhanty JD, Handyside AH. The origin of genetic defects in the human and their detection in the preimplantation embryo. Hum Reprod Update 1995; 1 (3) 201-215
  • 44 Holland AJ, Cleveland DW. Boveri revisited: chromosomal instability, aneuploidy and tumorigenesis. Nat Rev Mol Cell Biol 2009; 10 (7) 478-487
  • 45 Bielanska M, Tan SL, Ao A. High rate of mixoploidy among human blastocysts cultured in vitro. Fertil Steril 2002; 78 (6) 1248-1253
  • 46 Clouston HJ, Herbert M, Fenwick J, Murdoch AP, Wolstenholme J. Cytogenetic analysis of human blastocysts. Prenat Diagn 2002; 22 (12) 1143-1152
  • 47 Munné S, Sultan KM, Weier HU, Grifo JA, Cohen J, Rosenwaks Z. Assessment of numeric abnormalities of X, Y, 18, and 16 chromosomes in preimplantation human embryos before transfer. Am J Obstet Gynecol 1995; 172 (4 Pt 1) 1191-1199 , discussion 1199–1201
  • 48 Chatzimeletiou K, Morrison EE, Prapas N, Prapas Y, Handyside AH. Spindle abnormalities in normally developing and arrested human preimplantation embryos in vitro identified by confocal laser scanning microscopy. Hum Reprod 2005; 20 (3) 672-682
  • 49 Treff NR, Su J, Taylor D, Scott Jr RT. Telomere DNA deficiency is associated with development of human embryonic aneuploidy. PLoS Genet 2011; 7 (6) e1002161
  • 50 Kotzot D. Complex and segmental uniparental disomy (UPD): review and lessons from rare chromosomal complements. J Med Genet 2001; 38 (8) 497-507
  • 51 Kotzot D. Complex and segmental uniparental disomy updated. J Med Genet 2008; 45 (9) 545-556
  • 52 Derijck AA, van der Heijden GW, Ramos L, Giele M, Kremer JA, de Boer P. Motile human normozoospermic and oligozoospermic semen samples show a difference in double-strand DNA break incidence. Hum Reprod 2007; 22 (9) 2368-2376
  • 53 Aitken RJ, De Iuliis GN, McLachlan RI. Biological and clinical significance of DNA damage in the male germ line. Int J Androl 2009; 32 (1) 46-56
  • 54 Aguilera A, Gómez-González B. Genome instability: a mechanistic view of its causes and consequences. Nat Rev Genet 2008; 9 (3) 204-217
  • 55 Hsiao SJ, Smith S. Sister telomeres rendered dysfunctional by persistent cohesion are fused by NHEJ. J Cell Biol 2009; 184 (4) 515-526
  • 56 Nitiss JL. Targeting DNA topoisomerase II in cancer chemotherapy. Nat Rev Cancer 2009; 9 (5) 338-350
  • 57 Perry J, Slater HR, Choo KH. Centric fission—simple and complex mechanisms. Chromosome Res 2004; 12 (6) 627-640
  • 58 Guerrero AA, Gamero MC, Trachana V , et al. Centromere-localized breaks indicate the generation of DNA damage by the mitotic spindle. Proc Natl Acad Sci U S A 2010; 107 (9) 4159-4164
  • 59 Guerrero AA, Martínez-A C, van Wely KH. Merotelic attachments and non-homologous end joining are the basis of chromosomal instability. Cell Div 2010; 5: 13
  • 60 Martínez-A C, van Wely KH. Are aneuploidy and chromosome breakage caused by a CINgle mechanism?. Cell Cycle 2010; 9 (12) 2275-2280
  • 61 Schinzel A. Catalogue of Unbalanced Chromosome Aberrations in Man. 2nd ed. Berlin, Germany: Walter de Gruyter; 2001
  • 62 Marshall OJ, Chueh AC, Wong LH, Choo KH. Neocentromeres: new insights into centromere structure, disease development, and karyotype evolution. Am J Hum Genet 2008; 82 (2) 261-282
  • 63 Zuffardi O, Bonaglia M, Ciccone R, Giorda R. Inverted duplications deletions: underdiagnosed rearrangements??. Clin Genet 2009; 75 (6) 505-513
  • 64 Rossi E, Riegel M, Messa J , et al. Duplications in addition to terminal deletions are present in a proportion of ring chromosomes: clues to the mechanisms of formation. J Med Genet 2008; 45 (3) 147-154