RSS-Feed abonnieren
DOI: 10.1055/s-2008-1034289
© Georg Thieme Verlag KG Stuttgart · New York
Identification of Medicinal Ganoderma Species Based on PCR with Specific Primers and PCR-RFLP
Publikationsverlauf
Received: August 19, 2007
Revised: November 29, 2007
Accepted: December 14, 2007
Publikationsdatum:
04. Februar 2008 (online)
Abstract
Ganoderma lucidum is an interesting shelf fungus that is also of medical importance in East Asian countries such as China, Japan and Korea. The fruit bodies of different Ganoderma species have similar colors and shapes, but are different regarding their medicinal properties. In order to provide molecular evidence for the genuine origin of G. lucidum, G. sinense and G. tsuga, fungal immunomodulatory protein (FIP) genes were cloned using genomic walker technology and their sequences were then determined. Based on the sequences of cloned FIP genes, we designed three pairs of species-specific primers for amplification and sequencing of FIP genes. These new primers allowed an effective amplification and sequencing of FIP genes from representative species of G. lucidum, G. sinense and G. tsuga. Phylogenetic relationships were resolved quite efficiently by the FIP gene sequences, which proved to be more useful than other genetic marker techniques in phylogenetic reconstruction of G. lucidum, G. sinense and G. tsuga.
Key words
Ganoderma - fungal immunomodulatory protein - identification - PCR
References
- 1 Chinese Pharmacopoeia Committee (ed.). Pharmacopoeia of the People’s Republic of China. Beijing; Chemical Industry Press 2005: 130
- 2 Chen T Q, Li K B. Resources, taxonomy, ecological distribution, exploitation and utilization of Ganodermataceae from China. Acta Agric Univ Jiangxiensis. 2004; 26 89-95
- 3 Zhou X W, Lin J, Yin Y Z, Zhao J Y, Sun X F, Tang K X. Ganodermataceae: natural products and their related pharmacological functions. Am J Chin Med. 2007; 35 559-74
- 4 Wu X L, Zhang X Q, Zhong J X, Zhou FL Lian B. Study on the Ganodermataceae species from Guizhou with descriptions of a new species. Guizhou Sci. 1994; 12 54-63
- 5 Xing Z T, Yu Q H, Zhang J S, Pan Y J. Comparative study on triterpenes in different Ganoderma species. J Chin Med Mater. 2004; 27 575-6
- 6 Hibbett D S, Donoghue M J. Progress toward a phylogenetic classification of the Polyporaceae through parsimony analysis of mitochondrial ribosomal DNA sequences. Can J Bot. 1995; 73 S853-61
- 7 Lee J S, Lim M O, Cho K Y, Cho J H, Chang S Y, Nam D H. Identification of medicinal mushroom species based on nuclear large subunit rDNA sequences. J Microbiol. 2006; 44 29-34
- 8 Latiffah Z, Harikrishna K, Tan S G, Tan S H, Abdullah F, Ho Y W. Restriction analysis and sequencing of the ITS regions and 5.8S gene of rDNA of Ganoderma isolates from infected oil palm and coconut stumps. Ann Appl Biol. 2002; 141 133-42
- 9 Gottlieb A M, Ferrer E, Wright J E. rDNA analyses as an aid to the taxonomy of species of Ganoderma. . Mycol Res. 2000; 104 1033-45
- 10 Hong S G, Jung H S. Phylogenetic analysis of Ganoderma based on nearly complete mitochondrial small-subunit ribosomal DNA sequences. Mycologia. 2004; 96 742-55
- 11 Moncalvo J M, Wang H F, Hseu R S. Gene phylogeny of the Ganoderma lucidum complex based on ribosomal DNA sequences. Comparison with traditional taxonomic characters. Mycol Res. 1995; 99 1489-99
- 12 Hseu R S. The use of ribosomal gene and mangenese superoxide dismutase gene nucleotide sequence data for species identification and phylogeny in the Ganoderma lucidum complex. The 7th International Symposium on Ganoderma lucidum,. Seoul; 1997 16-9
- 13 Zhou X W, Lin J, Yin Y Z, Li Q Z, Zhao J Y, Tang K X. Comparison on of rapid DNA extraction methods applied to PCR identification of medicinal mushroom Ganoderma spp. Prep Biochem Biotechnol. 2007; 37 369-80
Prof. Xuanwei Zhou
Plant Biotechnology Research Center
Fudan-SJTU-Nottingham Plant Biotechnology R&D Center
School of Agriculture and Biology
Shanghai Jiao Tong University
Huashan Road 1954
Shanghai 200030
People’s Republic of China
Telefon: +86-21-6564-2425
Fax: +86-21-6564-2425
eMail: xuanweizhou@sjtu.edu.cn
Prof. Juan Lin, Ph.D.
State Key Laboratory of Genetic Engineering
School of Life Sciences
Morgan-Tan International Center for Life Sciences
Fudan-SJTU-Nottingham Plant Biotechnology R&D Center
Fudan University
220 Handan Road
Shanghai 200433
People’s Republic of China
Telefon: +86-21-6564-2772
Fax: +86-21-6564-3552
eMail: linjuan@fudan.edu.cn