Open Access
CC BY 4.0 · Eur J Dent 2023; 17(03): 649-662
DOI: 10.1055/s-0042-1750803
Original Article

Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (Coffea Canephora) Ethanol Extract: An In Silico and In Vitro Study

Alexander Patera Nugraha
1   Dental Implant Group, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
2   Department of Orthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
3   Postgraduate Department of Dental Health Science, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
I Gusti Aju Wahju Ardani
1   Dental Implant Group, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
2   Department of Orthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Ratri Maya Sitalaksmi
1   Dental Implant Group, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
4   Department of Prosthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Nastiti Faradilla Ramadhani
1   Dental Implant Group, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
3   Postgraduate Department of Dental Health Science, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
5   Department of Dentomaxillofacial Radiology, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Desi Rachmayanti
2   Department of Orthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Dina Kumala
2   Department of Orthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Viol Dhea Kharisma
6   Department of Biology, Faculty of Mathematic and Natural Science, Universitas Brawijaya, Malang, Indonesia
,
Desintya Rahmadani
7   Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Martining Shoffa Puspitaningrum
7   Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Yuniar Rizqianti
7   Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Muhammad Dimas Aditya Ari
1   Dental Implant Group, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
4   Department of Prosthodontics, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Albertus Putera Nugraha
8   Faculty of Medicine, Universitas Airlangga, Surabaya, Indonesia
,
Tengku Natasha Eleena binti Tengku Ahmad Noor
9   Membership of Faculty of Dental Surgery, Edinburgh University, United Kingdom
10   Malaysian Armed Forces Dental Officer, 609 Armed Forces Dental Clinic, Kem Semenggo, Kuching, Sarawak, Malaysia.
,
Muhammad Luthfi
11   Oral Biology Department, Faculty of Dental Medicine, Universitas Airlangga, Surabaya, Indonesia
› Author Affiliations
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Abstract

Objective This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study.

Materials and Methods Absorption, distribution, metabolism, excretion and toxicity prediction, molecular docking simulation, and visualization of chlorogenic acid (CGA) and coumaric acid (CA) as anti-inflammatory, antioxidant, and antibacterial were investigated in silico. Inhibition zone by diffusion method, minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) of RGCBE extract against Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), and Prevotella intermedia (Pi) were done.

Statistical Analysis the analysis of variance (ANOVA) difference test, and the post-hoc Tukey's Honest Significant Different (HSD) with a different significance value of p<0.05

Results GCA and CA compounds are good drug molecules and it has low toxicity. Chlorogenic acid have higher binding activity than coumaric acid to tumor necrosis factor (TNF)-α, nuclear factor (NF)-κB, receptor activation NF-κB (RANK) and its ligand (RANKL), interleukin (IL)-6, IL-10, runt related transcription factor (RUNX2), receptor activator nuclear Kappa beta Ligand-osteoprotegrin osteocalcin (RANKL-OPG), osteocalcin, nuclear factor associated T-cell 1 (NFATc1), tartate resistant acid phosphatase (TRAP), peptidoglycan, flagellin, dectin, Hsp70, and Hsp10 protein. RGCB ethanol extract has high antioxidant ability and it has MIC, MBC, and inhibit the growth of Aa, Pg, Fn, and Pi at 50% concentration with significantly different (p=0.0001 and<0.05).

Conclusion RGCB ethanol extract has high antioxidant ability and 50% RGCB ethanol extract may act as strong anti–peri-implantitis bacteria in vitro. In addition, CGA in RGCB potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic in silico.



Publication History

Article published online:
08 September 2022

© 2022. The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution License, permitting unrestricted use, distribution, and reproduction so long as the original work is properly cited. (https://creativecommons.org/licenses/by/4.0/)

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